
Massachusetts Institute of Technology
All-atom diffusion-based generative model developed for de novo design of protein and peptide binders across a wide array of target types
Proteins generated
Proteins tested

Baker Lab
A flexible de novo binder design workflow using RFdiffusion for backbone generation
Proteins generated
Proteins tested

EPFL/MIT
Protein binder design pipeline that can be used to design miniprotein and peptide binders
Proteins generated
Proteins tested
2VSMTested
Binders
The protein Nipah virus uses to latch onto human cells. The disease kills 40 to 75 percent of those infected and has no approved treatment.
1IVOTested
Binders
A growth signal receptor, mutated in many lung cancers and overproduced in brain tumours, and a target of both antibody and small-molecule drugs.
2LGVTested
Binders
The shared working part of a large family of enzymes that tag proteins for destruction, accounting for about a fifth of what a cell deliberately destroys.
2GDZTested
Binders
An enzyme that switches off a signal involved in tissue repair. It grows more active with age, and blocking it rebuilds muscle and cartilage in mice.
Adaptyv Bio · 4 months ago
Data type
Proteins
Targets
Results from the GEM x Adaptyv RBX1 Binder Design Competition.





+317
Adaptyv Bio · 7 months ago
Data type
Proteins
Targets
Experimental validation results for 1,196 protein designs targeting the deadly Nipah virus, yielding 111 binders (28 single-digit nM) with associated developability metrics.





+1196

Massachusetts Institute of Technology · 10 months ago
Data type
Proteins
Targets
To validate BoltzGen in its initial preprint release, 422 designed proteins were experimentally tested against 14 distinct targets.





+383



Proteinbase brings together protein designs, experimental results, and design methods in one place to share, compare, and learn.
id: noble-bat-topaz

IL-7Ra
Strong
1.4e-9 M
True
12.5 kDa
119
id: lunar-zebra-topaz

EGFR
Strong
1.9e-9 M
True
25.9 kDa
241
id: brisk-boar-cloud

MDM2
Strong
1.7e-7 M
True
12.1 kDa
102
id: golden-cobra-iron

IFNAR2
Medium
5.7e-8 M
True
11.1 kDa
92