
Massachusetts Institute of Technology
All-atom diffusion-based generative model developed for de novo design of protein and peptide binders across a wide array of target types
Proteins generated
Proteins tested

Baker Lab
A flexible de novo binder design workflow using RFdiffusion for backbone generation
Proteins generated
Proteins tested

EPFL/MIT
Protein binder design pipeline that can be used to design miniprotein and peptide binders
Proteins generated
Proteins tested
id: noble-bat-topaz

IL-7Ra
Strong
1.4e-9 M
True
12.5 kDa
119
id: lunar-zebra-topaz

EGFR
Strong
1.9e-9 M
True
25.9 kDa
241
id: brisk-boar-cloud

MDM2
Strong
1.7e-7 M
True
12.1 kDa
102
id: golden-cobra-iron

IFNAR2
Medium
5.7e-8 M
True
11.1 kDa
92



Proteinbase brings together protein designs, experimental results, and design methods in one place to share, compare, and learn.
Adaptyv Bio · 5 months ago
Data type
Proteins
Targets
Results from the GEM x Adaptyv RBX1 Binder Design Competition.





+317
Adaptyv Bio · 8 months ago
Data type
Proteins
Targets
Experimental validation results for 1,196 protein designs targeting the deadly Nipah virus, yielding 111 binders (28 single-digit nM) with associated developability metrics.





+1196

Massachusetts Institute of Technology · 11 months ago
Data type
Proteins
Targets
To validate BoltzGen in its initial preprint release, 422 designed proteins were experimentally tested against 14 distinct targets.





+383
2VSMTested
Binders
The protein Nipah virus uses to latch onto human cells. The disease kills 40 to 75 percent of those infected and has no approved treatment.
1IVOTested
Binders
A growth signal receptor, mutated in many lung cancers and overproduced in brain tumours, and a target of both antibody and small-molecule drugs.
2LGVTested
Binders
The shared working part of a large family of enzymes that tag proteins for destruction, accounting for about a fifth of what a cell deliberately destroys.
2GDZTested
Binders
An enzyme that switches off a signal involved in tissue repair. It grows more active with age, and blocking it rebuilds muscle and cartilage in mice.