In this challenge, Theorema proposed and prioritized the use of a shared computational stack (RFdi usion ProteinMPNN Boltz2 MMseqs2) across two complementary strategies: (1) a scale-rst exploration track (larger run volume to maximize search-space coverage before structured triage) and (2) a focused iterative, hypothesis-driven track (fewer targeted runs to improve decision quality). RFdi usion generated candidate backbones, ProteinMPNN generated sequences, Boltz2 evaluated binder/target complex quality, and MMseqs2 was used for novelty gating. We provide 25 best candidate binders. All submitted candidates were designed de novo and screened for novelty/compliance against UniRef50 under competition rules (minimum 25% edit distance / ≤75% identity threshold framework) with invalid motif-sca olded or lead-optimized non-antibody designs excluded. In-silico results showed convergence toward higher-condence designs during iterative renement, including improved epitope productivity for E2-face targeting and top-performing candidates reaching ipTM up to ~0.89 in the strongest batches. Ranking and progression were based primarily on interface metrics: ipTM (campaign target >0.88), with additional artifact-aware controls (including MSA sensitivity checks and repetitive-sequence ltering).
https://drive.google.com/file/d/18gdDrgMQycEh2tWShRj5pU0svDww0vhM/view?usp=sharing
id: wild-lynx-ruby
No preview available
--
--
--
--
--
63
id: bright-heron-moss
No preview available
--
--
--
--
--
74
id: small-mole-reed
No preview available
RBX1
0.01
--
--
--
58
id: gentle-jaguar-lava
No preview available
--
--
--
--
--
72
id: quiet-fox-moss
No preview available
--
--
--
--
--
63
id: dark-ant-willow
No preview available
--
--
--
--
--
70
id: shy-seal-clay
No preview available
--
--
--
--
--
72
id: gentle-shark-willow
No preview available
--
--
--
--
--
67
id: calm-crow-cypress
No preview available
--
--
--
--
--
65
id: violet-ibis-onyx
No preview available
--
--
--
--
--
81
id: bright-yak-ember
No preview available
--
--
--
--
--
90
id: bright-raven-snow
No preview available
--
--
--
--
--
65
id: swift-orca-pearl
No preview available
--
--
--
--
--
90
id: frozen-orca-maple
No preview available
--
--
--
--
--
88
id: quick-vole-moss
No preview available
--
--
--
--
--
63
id: lunar-ibis-flint
No preview available
--
--
--
--
--
80
id: wild-vole-ivy
No preview available
--
--
--
--
--
83
id: calm-ram-leaf
No preview available
--
--
--
--
--
70
id: steady-otter-crystal
No preview available
--
--
--
--
--
85
id: hollow-falcon-vine
No preview available
--
--
--
--
--
66
id: scarlet-hawk-lava
No preview available
--
--
--
--
--
88