The ability to design target and epitope specific binders has revolutionised the field of protein design. Here we combine various state-of-the-art approaches, such as RFdiffusion, BindCraft, AF3 and Boltz2 to iteratively design de-novo protein binders. In addition to convential scoring metrics such as ipTM and ipSAE we also include physics-based scoring methods to downselect and identify promising candidates for experimental validations.
id: swift-ibis-cypress

Nipah Virus Glycoprotein G
None
89.83
True
8.9 kDa
80
id: rapid-bear-reed

Nipah Virus Glycoprotein G
None
88.53
True
9.4 kDa
80
id: rough-deer-rose

Nipah Virus Glycoprotein G
None
88.95
True
9.2 kDa
80
id: vast-moth-rose

Nipah Virus Glycoprotein G
None
91.93
False
11.1 kDa
101