The tool we used to design these binders is Prometheus, a protein design method that uses an inverse folding model as a reinforcement learning agent to achieve self-optimization. In our workflow, the model achieves automatic updates of parameters through "generation-evaluation-optimization" loop, gradually learning the ability to generate better binders, which greatly reduces the scale and cost of screening and experimental verification, and significantly enhances experimental success rates.
id: wild-goat-pine

Nipah Virus Glycoprotein G
0.86
64.12
--
6.0 kDa
56
id: amber-fox-opal

Nipah Virus Glycoprotein G
0.83
69.43
--
5.8 kDa
56
id: dark-bison-willow

Nipah Virus Glycoprotein G
0.80
78.66
--
6.2 kDa
56
id: gentle-ibis-cedar

Nipah Virus Glycoprotein G
0.77
39.75
--
7.3 kDa
56
id: rapid-mole-orchid

Nipah Virus Glycoprotein G
0.75
86.41
--
6.1 kDa
55
id: silent-raven-reed

Nipah Virus Glycoprotein G
0.75
47.41
--
6.2 kDa
55
id: mellow-panther-orchid

Nipah Virus Glycoprotein G
0.73
38.85
--
5.9 kDa
55
id: deep-jaguar-pine

Nipah Virus Glycoprotein G
0.65
90.62
--
6.2 kDa
65
id: solid-deer-cloud

Nipah Virus Glycoprotein G
0.27
90.69
--
6.3 kDa
65
id: small-orca-iron

Nipah Virus Glycoprotein G
0.20
53.65
--
6.0 kDa
56