This design set was generated using ProteinDJ (Papenfuss Lab) on the UNSW Katana HPC, targeting the Nipah virus G glycoprotein (NiV-G; residues A212–A600) at key receptor-binding interface hotspots A532, A557, and A559. The goal was to explore de novo binder scaffolds that complement this epitope while maintaining structural diversity and compactness. Designs were restricted to 10–199 amino acids and filtered for high predicted interface quality. Selected sequences represent the top ten models by predicted interface stability and novelty, with no significant homology to known NiV-G or ephrin-B2 sequences.
id: jade-owl-iron

Nipah Virus Glycoprotein G
None
87.56
True
15.4 kDa
135
id: amber-moth-snow

Nipah Virus Glycoprotein G
None
84.04
True
10.4 kDa
85
id: green-orca-thorn

Nipah Virus Glycoprotein G
None
87.36
True
9.8 kDa
86
id: azure-orca-dust

Nipah Virus Glycoprotein G
None
83.99
True
4.9 kDa
42
id: calm-falcon-ivy

Nipah Virus Glycoprotein G
None
83.71
True
20.1 kDa
175
id: shy-goat-cypress

Nipah Virus Glycoprotein G
None
85.87
True
15.2 kDa
132
id: crimson-crane-stone

Nipah Virus Glycoprotein G
None
79.67
True
9.7 kDa
82
id: quick-lion-flint

Nipah Virus Glycoprotein G
0.00
82.89
--
14.1 kDa
119
id: silent-ox-cedar

Nipah Virus Glycoprotein G
0.12
83.91
--
14.2 kDa
118
id: solid-wolf-lotus

Nipah Virus Glycoprotein G
0.00
86.44
--
7.3 kDa
65